CorreLogo Submission Form with example 5S loop E region
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CorreLogo Submission Form: example 5S loop E region

Home Small example (tRNA anticodon) Loop E region Large example(tRNA) Help

Quickstart:

All you probably have to do in order to run this example is to click "Submit Query" at the bottom of this page. If you want to run your own set of sequences or you want to customize the output, enter values into the sections one to three of the form below (sections 2 and 3 are optional). For more detailed information consult our help page.

Background of example sequences:

The sequences provided in this example correspond to the 5S loop E region. The alignment is derived from the Rfam entry RF00001.

1.

Page with empty sequence text area

DNARNAautomatic guess


2.


3. Customize generated output (optional):

bits
bits


On Off


vertical flat none
standard none


standard none


standard rainbow



Page with empty sequence text area


Useful Links:

Link to the Rfam entry of tRNA
For an explanation of the generated output and help converning VRML and JVX please see our help page.
If you want to pick up a previously computed result, click here.
Go to CorreLogo Homepage.